rs11652716 chr17:59406914 T>C
- Sequence
ttggcactgcccagttctcagtca[T/C]ttatttccagggcagctggaagaa
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CREB1_HUMAN RFX1_HUMAN MNT_HUMAN FOS_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CREB1_HUMAN | -3.28 | 2.31 | 2.50 | n/a | No Hit | |||
| RFX1_HUMAN | n/a | 0.46 | 2.75 | 0.95 | Weak Concordant | |||
| MNT_HUMAN | -2.39 | 2.05 | 2.50 | n/a | n/a | |||
| FOS_HUMAN | -3.91 | 2.14 | 2.50 | n/a | n/a |
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Motif analysis
