rs11662171 chr18:42114464 C>G
- Sequence
gctgatggcagtttaaatgtcttc[C/G]cagaagccattcagctaattgttg
- ASB in cell types
- foreskin keratinocyte GM12878 (female B-cells) B-cells
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| foreskin keratinocyte | 0.33 | n/a | 2.83 | |||
| GM12878 (female B-cells) | 0.48 | 0.39 | 1.29 | |||
| B-cells | 2.00 | n/a | 2.00 |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Cerebellum, Brain_Cortex, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid