rs11668813 chr19:46281135 G>A
- Sequence
agcctcaaactcctggactcaaac[G/A]atcctcccacctcagcctcccgag
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 0.99 | 0.24 | 1.44 | n/a | n/a | |||
| CTCF_HUMAN | 0.72 | 0.32 | 1.34 | n/a | No Hit | |||
| SMC3_HUMAN | 0.83 | 0.19 | 1.47 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Esophagus_Mucosa, Heart_Atrial_Appendage, Muscle_Skeletal, Nerve_Tibial, Whole_Blood