rs11669005 chr19:44577250 A>G
- Sequence
tgaggttggtacaaaagtaattgc[A/G]gattttgccattacttttgcacca
- ASB in cell types
- A549 (lung carcinoma) VCaP (prostate carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| A549 (lung carcinoma) | 0.32 | 0.50 | 1.43 | |||
| VCaP (prostate carcinoma) | 2.76 | n/a | 3.00 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Lung, Muscle_Skeletal, Nerve_Tibial, Testis, Thyroid, Whole_Blood