rs11669069 chr19:7944131 T>C
- Sequence
ctgcccctgcaatgactgattgat[T/C]gacaatggctgagagaccagcaag
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) GM12878 (female B-cells)
- ASB for transcription factors
- FOXK2_HUMAN SMCA4_HUMAN GLIS1_HUMAN NRF1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.28 | 1.48 | 1.67 | n/a | n/a | |||
| SMCA4_HUMAN | -1.23 | 1.91 | 2.00 | n/a | n/a | |||
| GLIS1_HUMAN | -1.73 | 1.79 | 2.00 | n/a | n/a | |||
| NRF1_HUMAN | -1.17 | 1.77 | 2.00 | n/a | No Hit |
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