rs11671717 chr19:47305541 G>C
- Sequence
tggaaatcctgggtgagtaacgca[G/C]actgcgcacatggcttcaattagc
- ASB in cell types
- HEK293 (embryonic kidney) GM12878 (female B-cells) liver tibial nerve
- ASB for transcription factors
- RXRA_HUMAN EP300_HUMAN IKZF1_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RXRA_HUMAN | 1.99 | -1.29 | 1.33 | n/a | No Hit | |||
| EP300_HUMAN | 1.66 | -0.41 | 1.38 | n/a | n/a | |||
| IKZF1_HUMAN | 0.58 | 0.22 | 1.39 | n/a | No Hit | |||
| STAT1_HUMAN | 1.24 | -0.36 | 2.11 | n/a | No Hit | |||
| SP1_HUMAN | 1.64 | -0.84 | 1.33 | n/a | No Hit |
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