rs11678375 chr2:113078114 T>C
- Sequence
cacatctgaggtgagtcatcaatg[T/C]ggctgggacccagggcttggactg
- ASB in cell types
- coronary artery smooth muscle MCF7 (Invasive ductal breast carcinoma) HT29 (colon adenocarcinoma)
- ASB for transcription factors
- JUN_HUMAN JUND_HUMAN CREB1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.30 | -0.45 | 1.39 | n/a | No Hit | |||
| JUND_HUMAN | 0.81 | -0.24 | 1.67 | n/a | No Hit | |||
| CREB1_HUMAN | 1.90 | -1.70 | 1.33 | n/a | No Hit |
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