rs116794050 chr5:154757331 G>T
- Sequence
atcccagcagagccgtgtcagcgt[G/T]gggggagaggcggtgcagaatatg
- ASB in cell types
- CD14+ monocytes MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- STAT1_HUMAN ZN143_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 1.97 | n/a | 2.50 | n/a | No Hit | |||
| ZN143_HUMAN | 1.90 | -1.28 | 3.00 | 0.26 | Weak Discordant |
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Motif analysis
