rs11685258 chr2:100065332 T>G
- Sequence
ggctgatacacaatgaaataaggg[T/G]taacataaaagagtacacttcatt
- ASB in cell types
- VCaP (prostate carcinoma) HEK293 (embryonic kidney)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.80 | 1.35 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 0.43 | 1.37 | 1.82 | -0.66 | Weak Discordant |
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Motif analysis
