ADASTRA v1.6.10
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rs11685672
chr2:68775149
C
>
G
Sequence
ctcagccccctctggggttcctct[C/G]tcctctccgcccactctttgctca
ASB in cell types
K562 (myelogenous leukemia)
CD14+ monocytes
ASB for transcription factors
STAT1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN
1.49
-1.22
0.03
1.00
2.50
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
chronic kidney disease
,
diastolic blood pressure (dbp)
,
systolic blood pressure (sbp)
,
total cholesterol
GTEx eQTL
Brain_Anterior_cingulate_cortex_BA24
,
Brain_Cortex
,
Brain_Frontal_Cortex_BA9
,
Breast_Mammary_Tissue
,
Colon_Transverse
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)