rs116895601 chr10:68900841 G>A
- Sequence
ctgttggtcgttaacatctccccc[G/A]caatgggcgggatggagggcttca
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- EGR1_HUMAN GABP1_HUMAN MGAP_HUMAN MNT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EGR1_HUMAN | 1.84 | -2.76 | 1.39 | -1.13 | Weak Concordant | |||
| GABP1_HUMAN | 0.75 | n/a | 1.33 | n/a | n/a | |||
| MGAP_HUMAN | 0.83 | n/a | 1.33 | n/a | n/a | |||
| MNT_HUMAN | 1.59 | -0.18 | 1.33 | n/a | n/a | |||
| SPT5H_HUMAN | 1.58 | -1.86 | 1.33 | n/a | n/a |
Items per page:
1 – 5 of 19
Motif analysis
