ADASTRA v1.6.10
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rs11694193
chr2:46377373
C
>
T
Sequence
gccccatgctccccagttcgcaac[C/T]cgctgccaccctctcctggccttg
ASB in cell types
foreskin keratinocyte
K562 (myelogenous leukemia)
medulloblastoma
ASB for transcription factors
CTCF_HUMAN
REST_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
-1.29
1.97
1.00
5.7·10
-6
1.83
n/a
No Hit
REST_HUMAN
-1.93
2.00
1.00
0.04
2.00
n/a
No Hit
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5
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Motif analysis
No data available
Genetic associations
GRASP
renal cell carcinoma (renal cancer)
,
serum creatinine
GTEx eQTL
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)