rs11696277 chr20:17283959 G>A
- Sequence
ttgtcattgcaggagccatggcca[G/A]aatccacatttcccatatctaatg
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.39 | 0.85 | 1.44 | 0.50 | Weak Concordant |
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Motif analysis
