rs11696564 chr20:50166363 T>C
- Sequence
cagctcatttgaaaagcggctgcc[T/C]tttcttcttttctcttctcttctc
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) HT29 (colon adenocarcinoma) monocyte-derived macrophages
- ASB for transcription factors
- MNT_HUMAN ARNT_HUMAN TF65_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MNT_HUMAN | 2.18 | -0.24 | 2.50 | n/a | n/a | |||
| ARNT_HUMAN | 1.78 | -1.41 | 2.00 | n/a | No Hit | |||
| TF65_HUMAN | 1.88 | 0.57 | 2.25 | n/a | No Hit | |||
| ESR1_HUMAN | 1.15 | -0.55 | 4.56 | n/a | No Hit | |||
| CLOCK_HUMAN | 1.91 | n/a | 3.50 | n/a | No Hit |
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