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rs11696646 chr20:17928779 C>T

Sequence
ataaatattgacaaaggtgcggag[C/T]ggcaggaaggccaggtggccgagg
ASB in cell types
breast tumor tissue
ASB for transcription factors
FOXA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN 1.33 0.62 0.620.03 1.64 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy)
GTEx eQTL Adipose_Visceral_Omentum Breast_Mammary_Tissue Esophagus_Mucosa Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid

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