rs11717415 chr3:186965312 T>G
- Sequence
ttgactcataatctctaatgcggg[T/G]gtgggggacttcctgccaaatgtg
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- EGR1_HUMAN IKZF1_HUMAN IKZF2_HUMAN MEF2B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EGR1_HUMAN | n/a | 2.59 | 1.33 | 7.51 | Concordant | |||
| IKZF1_HUMAN | -1.52 | 1.30 | 1.33 | n/a | No Hit | |||
| IKZF2_HUMAN | -0.83 | 1.33 | 1.33 | n/a | n/a | |||
| MEF2B_HUMAN | -2.05 | 2.11 | 1.33 | n/a | No Hit | |||
| REQU_HUMAN | -1.79 | 2.08 | 1.33 | n/a | n/a |
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Motif analysis
