rs1171747 chr10:130081918 G>C
- Sequence
aaaatcccagtaaactattttata[G/C]agttatactagttgatactaacgg
- ASB in cell types
- LNCaP (prostate carcinoma) VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.55 | -0.32 | 1.57 | n/a | No Hit | |||
| ANDR_HUMAN | 0.72 | 0.07 | 1.58 | 2.90 | Discordant |
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Motif analysis
