rs117176598 chr11:76598726 C>T
- Sequence
tagaggtctctctaactgtgcgct[C/T]cagcttagtagccaccagccgcac
- ASB in cell types
- H1 (embryonic stem cells) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN KAISO_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.70 | 0.30 | 1.41 | n/a | No Hit | |||
| KAISO_HUMAN | 1.33 | -1.60 | 1.33 | n/a | No Hit |
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