rs117280534 chr7:53875659 C>G
- Sequence
ctgtgtaattaactgaattgttta[C/G]acaagagagataaagatgttacgt
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | 2.20 | n/a | 1.33 | -6.76 | Concordant |
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Motif analysis
