rs117416839 chr7:4641901 T>G
- Sequence
gttcccctcgcgtgaatccgccga[T/G]ccgggctttggggcccgccgggag
- ASB in cell types
- A549 (lung carcinoma) HepG2 (hepatoblastoma) breast tumor tissue
- ASB for transcription factors
- JUN_HUMAN ESR1_HUMAN FOXA2_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.04 | -0.07 | 2.00 | n/a | No Hit | |||
| ESR1_HUMAN | 1.88 | n/a | 2.50 | n/a | No Hit | |||
| FOXA2_HUMAN | 1.75 | -1.48 | 1.33 | n/a | No Hit |
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