rs11746700 chr5:116032208 C>T
- Sequence
aactatagttcaaaaatattacat[C/T]actaccctgtgttttggggccact
- ASB in cell types
- HCT-116 (colon carcinoma) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CEBPB_HUMAN SP1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | 1.38 | -1.15 | 1.33 | -3.32 | Concordant | |||
| SP1_HUMAN | 1.80 | -1.53 | 1.33 | n/a | No Hit |
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Motif analysis
