rs11748597 chr5:1950819 A>G
- Sequence
gcgcgagtcgtccgctgtgtgtgc[A/G]tcatctgctgtgcgtgtgtcatct
- ASB in cell types
- HEK293 (embryonic kidney) coronary artery smooth muscle MCF7 (Invasive ductal breast carcinoma) foreskin keratinocyte
- ASB for transcription factors
- JUND_HUMAN ZBT26_HUMAN INSM2_HUMAN ZBT21_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUND_HUMAN | 2.69 | n/a | 1.33 | 2.37 | Discordant | |||
| ZBT26_HUMAN | n/a | 1.19 | 3.00 | n/a | n/a | |||
| INSM2_HUMAN | n/a | 3.62 | 3.00 | n/a | n/a | |||
| ZBT21_HUMAN | n/a | 0.89 | 6.00 | n/a | n/a | |||
| ZN639_HUMAN | n/a | 3.39 | 3.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Nerve_Tibial, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid