rs11752059 chr6:2868292 C>T
- Sequence
ccaggctgcaatgcagttgcgcaa[C/T]ctcggcttactgcaagctccgcgt
- ASB in cell types
- macrophages Ishikawa (endometrial adenocarcinoma)
- ASB for transcription factors
- CEBPB_HUMAN CEBPA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | 1.18 | 0.37 | 1.83 | 2.14 | Discordant | |||
| CEBPA_HUMAN | 1.71 | -0.07 | 1.78 | 1.08 | Weak Discordant |
Items per page:
1 – 2 of 2
Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Tibial, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Thyroid