rs1175397 chr13:44918011 G>A
- Sequence
gaccatgtgggagacggcaatagc[G/A]actccaagcctagacaaattgagt
- ASB in cell types
- HEK293 (embryonic kidney) MCF7 (Invasive ductal breast carcinoma) CD14+ monocytes NB4 (acute promyelocytic leukemia )
- ASB for transcription factors
- MEF2B_HUMAN TBP_HUMAN STAT1_HUMAN MNT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEF2B_HUMAN | n/a | 2.10 | 1.33 | n/a | No Hit | |||
| TBP_HUMAN | 3.07 | n/a | 1.33 | n/a | No Hit | |||
| STAT1_HUMAN | 1.43 | -0.31 | 2.27 | n/a | No Hit | |||
| MNT_HUMAN | n/a | 2.68 | 3.00 | n/a | n/a | |||
| ESR1_HUMAN | 2.17 | n/a | 2.50 | n/a | No Hit |
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