rs11760830 chr7:33144540 C>T
- Sequence
gctttcttgtttcagttctcatac[C/T]gtaaacaagtgtcctttcatggtc
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | 2.35 | -2.71 | 1.33 | 4.72 | Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Amygdala, Brain_Anterior_cingulate_cortex_BA24, Brain_Frontal_Cortex_BA9, Brain_Spinal_cord_cervical_c-1, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Thyroid