rs11768380 chr7:155207609 T>C
- Sequence
tacgcgtgtgtgcgtgcgtgtgtg[T/C]gtctgtgtgtgggaatgggtgtga
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney)
- ASB for transcription factors
- EGR2_HUMAN ZN600_HUMAN HDAC2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EGR2_HUMAN | n/a | 2.51 | 2.00 | -1.23 | Weak Discordant | |||
| ZN600_HUMAN | n/a | 2.60 | 2.00 | n/a | n/a | |||
| HDAC2_HUMAN | -0.31 | 1.92 | 1.50 | n/a | n/a |
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Motif analysis
