rs117796 chr20:38646218 A>G
- Sequence
gcccccgaccccagacaggtggag[A/G]agggccgaggcgacaggagggcac
- ASB in cell types
- foreskin keratinocyte GM12878 (female B-cells)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| foreskin keratinocyte | n/a | 0.60 | 2.50 | |||
| GM12878 (female B-cells) | 0.61 | 0.47 | 1.37 |
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