rs1180803 chrX:103919525 C>T
- Sequence
tcagcagccctgtgaaggaggtag[C/T]agtgtgcccacttaacaggaaagg
- ASB in cell types
- HEK293T (embryonic kidney) HEK293 (embryonic kidney)
- ASB for transcription factors
- ZFX_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFX_HUMAN | -3.25 | 2.11 | 1.50 | n/a | No Hit | |||
| CTCF_HUMAN | -1.73 | 1.73 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Cerebellum, Cells_Cultured_fibroblasts, Nerve_Tibial, Pancreas, Pituitary, Skin_Sun_Exposed_Lower_leg, Testis