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rs118120590 chr19:34639670 A>T

Sequence
gtcaaatttaacttacttctgctc[A/T]aacaccaccaggaggcgctctttt
ASB in cell types
K562 (myelogenous leukemia) erythroid progenitors
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.09 -0.07 1.6·10-40.79 1.95 1.64 Weak Discordant
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Motif analysis

CTCF_HUMAN Weak Discordant
CTCF_HUMAN pic

Genetic associations

GTEx eQTL Muscle_Skeletal Spleen

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