ADASTRA v1.6.10
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rs118146241
chr14:75488792
C
>
T
Sequence
tatttccagacctcccaaattttc[C/T]aaagttcctgtgcattagctacat
ASB in cell types
A549 (lung carcinoma)
ASB for transcription factors
RAD21_HUMAN
CTCF_HUMAN
SMC3_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN
1.07
-0.44
6.3·10
-4
1.00
1.99
n/a
n/a
CTCF_HUMAN
0.80
0.04
1.3·10
-3
1.00
1.76
n/a
No Hit
SMC3_HUMAN
0.83
-0.34
8.7·10
-3
0.91
2.05
n/a
n/a
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Esophagus_Mucosa
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)