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rs118146241 chr14:75488792 C>T

Sequence
tatttccagacctcccaaattttc[C/T]aaagttcctgtgcattagctacat
ASB in cell types
A549 (lung carcinoma)
ASB for transcription factors
RAD21_HUMAN CTCF_HUMAN SMC3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN 1.07 -0.44 6.3·10-41.00 1.99 n/a n/a
CTCF_HUMAN 0.80 0.04 1.3·10-31.00 1.76 n/a No Hit
SMC3_HUMAN 0.83 -0.34 8.7·10-30.91 2.05 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Mucosa

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