rs11818724 chr10:3172750 T>C
- Sequence
agccgcctcagcacacacaggccc[T/C]gccgcccgccgcagcgccacattg
- ASB in cell types
- GM12878 (female B-cells) HepG2 (hepatoblastoma) H1 (embryonic stem cells)
- ASB for transcription factors
- FOXK2_HUMAN TBP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.11 | -0.30 | 1.33 | n/a | n/a | |||
| TBP_HUMAN | 1.63 | -1.65 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg