rs11823994 chr11:75372544 C>T
- Sequence
aataattactcaggtcaacctctt[C/T]actcttgttatagatgcttgggga
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) K562 (myelogenous leukemia) breast tumor tissue
- ASB for transcription factors
- ESR1_HUMAN GATA3_HUMAN FOXA1_HUMAN PKNX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 0.94 | 0.31 | 1.51 | n/a | No Hit | |||
| GATA3_HUMAN | 0.85 | 0.02 | 1.50 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.08 | 0.85 | 1.56 | n/a | No Hit | |||
| PKNX1_HUMAN | 1.46 | -0.12 | 1.67 | n/a | No Hit | |||
| GCR_HUMAN | 1.05 | -0.20 | 1.58 | n/a | No Hit |
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