rs11825497 chr11:94493391 C>G
- Sequence
aaagcgagtgtaaataaacaaaca[C/G]gtggtctgcggaggaacaccttta
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXK2_HUMAN SP130_HUMAN HDAC2_HUMAN EP400_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.98 | n/a | 2.00 | n/a | n/a | |||
| SP130_HUMAN | 2.21 | -2.25 | 1.33 | n/a | n/a | |||
| HDAC2_HUMAN | 1.84 | -1.59 | 2.00 | n/a | n/a | |||
| EP400_HUMAN | 2.48 | n/a | 2.00 | n/a | n/a | |||
| HDAC1_HUMAN | 1.99 | -0.74 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Hypothalamus, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Muscle_Skeletal, Thyroid, Whole_Blood