rs11855409 chr15:54168259 G>T
- Sequence
aaaaagttgctggctactttcgct[G/T]gtttacattgctattctaaaaaaa
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.25 | 1.75 | 1.73 | 3.80 | Concordant | |||
| FOXA1_HUMAN | -1.96 | 2.23 | 4.00 | 8.93 | Concordant |
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Motif analysis
