ADASTRA v1.6.10
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rs11860057
chr16:79770876
C
>
A
Sequence
ttctttcttaccctgcctaccctc[C/A]ccctttccctttgcaacttgtcac
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
IKZF1_HUMAN
ZNF24_HUMAN
PHF20_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN
2.25
-2.88
0.01
1.00
2.50
n/a
No Hit
ZNF24_HUMAN
2.16
-0.12
0.03
0.57
2.17
n/a
n/a
PHF20_HUMAN
2.31
-3.46
0.04
1.00
2.00
n/a
n/a
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Esophagus_Mucosa
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)