rs11867554 chr17:57541284 T>C
- Sequence
agtacagttatgagttgtcagaat[T/C]cccaactccagcgacacaaaccat
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- IKZF1_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | -1.65 | 2.04 | 1.33 | -1.91 | Weak Discordant | |||
| IKZF2_HUMAN | -1.69 | 1.85 | 1.33 | n/a | n/a |
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Motif analysis
