rs11868888 chr17:19004876 A>G
- Sequence
ggaagctgattcacccctcgacag[A/G]cagacagacctggggcggacgcac
- ASB in cell types
- Ishikawa (endometrial adenocarcinoma) HEK293 (embryonic kidney)
- ASB for transcription factors
- USF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| USF1_HUMAN | -0.49 | 2.20 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Muscularis, Muscle_Skeletal, Spleen, Whole_Blood