rs11868966 chr17:80892199 A>C
- Sequence
cttggctccgtggctcggtgagtc[A/C]tgtcaggcgtgctttctcacacgt
- ASB in cell types
- GM12878 (female B-cells) SK-N-SH (neuroblastoma) sigmoid colon PANC1 (pancreatic ductal adenocarcinoma)
- ASB for transcription factors
- BHE40_HUMAN IKZF1_HUMAN CTCF_HUMAN EP300_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BHE40_HUMAN | 0.65 | -0.66 | 1.33 | n/a | No Hit | |||
| IKZF1_HUMAN | 1.15 | -1.68 | 1.33 | n/a | No Hit | |||
| CTCF_HUMAN | 1.45 | -0.15 | 1.38 | n/a | No Hit | |||
| EP300_HUMAN | 1.73 | -0.47 | 1.53 | n/a | n/a |
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