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rs11878305 chr19:12938466 A>C

Sequence
cagcgttccgaggcgcagcctaac[A/C]tagtgaaccgacgaaggtccaatg
ASB in cell types
HeLa S3 (cervical adenocarcinoma)
ASB for transcription factors
CHD2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CHD2_HUMAN 2.14 n/a 0.031.00 2.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Putamen_basal_ganglia Cells_Cultured_fibroblasts Esophagus_Mucosa Thyroid

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