ADASTRA v1.6.10
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rs11891
chr17:78992703
G
>
A
Sequence
tctttgtatccattggccaagaac[G/A]ccgacatgtgagacttgcttcacc
ASB in cell types
K562 (myelogenous leukemia)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia)
0.90
-0.51
1.1·10
-3
1.00
2.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
EMBL-EBI
magnesium levels
GRASP
hdl cholesterol change with statins
,
ldl cholesterol
,
lp-pla2 mass
,
total cholesterol
,
triglycerides
GTEx eQTL
Brain_Cerebellum
,
Esophagus_Mucosa
,
Heart_Left_Ventricle
,
Pancreas
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale