rs11906573 chr20:50809568 G>A
- Sequence
ctccagatttgttctttttgctta[G/A]ttttgctttggctgtgagggctct
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- SIX4_HUMAN KAISO_HUMAN BMI1_HUMAN JUN_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SIX4_HUMAN | n/a | 3.64 | 4.00 | n/a | n/a | |||
| KAISO_HUMAN | n/a | 2.97 | 4.00 | n/a | No Hit | |||
| BMI1_HUMAN | n/a | 2.91 | 4.00 | n/a | n/a | |||
| JUN_HUMAN | n/a | 2.67 | 4.00 | n/a | No Hit | |||
| CLOCK_HUMAN | n/a | 2.41 | 5.00 | n/a | No Hit |
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