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rs11916971 chr3:168135032 A>G

Sequence
gtcatgggaagtaattcaatcatc[A/G]gggtgggtctttcccatgccattc
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN 2.10 n/a 1.8·10-31.00 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) height ldl cholesterol
GTEx eQTL Colon_Sigmoid

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