rs11964560 chr6:86937201 C>T
- Sequence
tgagtcccttgcccacacctccaa[C/T]cccgctggcccggtttataacatg
- ASB in cell types
- VCaP (prostate carcinoma) HEK293 (embryonic kidney) K562 (myelogenous leukemia)
- ASB for transcription factors
- CTCF_HUMAN TZAP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.28 | 1.44 | 1.61 | n/a | No Hit | |||
| TZAP_HUMAN | -2.16 | 2.36 | 2.00 | n/a | n/a |
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