rs11980748 chr7:47254156 G>A
- Sequence
gtcacactagtagggcagggcaga[G/A]cccgcttgaccccttccttgggag
- ASB in cell types
- THP-1 (acute monocytic leukemia)
- ASB for transcription factors
- VDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| VDR_HUMAN | -2.00 | 2.01 | 1.50 | 4.06 | Concordant |
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Motif analysis
