rs11989088 chr8:61734642 T>C
- Sequence
tttgcattagatactctatactga[T/C]acattgcaatatgttccgtaggtc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) LNCaP (prostate carcinoma) A549 (lung carcinoma) VCaP (prostate carcinoma)
- ASB for transcription factors
- GATA2_HUMAN STAT1_HUMAN CUX1_HUMAN GABPA_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA2_HUMAN | 1.30 | 0.17 | 1.33 | n/a | No Hit | |||
| STAT1_HUMAN | -2.97 | 2.19 | 2.50 | n/a | No Hit | |||
| CUX1_HUMAN | n/a | 2.45 | 2.00 | n/a | No Hit | |||
| GABPA_HUMAN | -0.49 | 1.04 | 1.53 | n/a | No Hit |
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