rs12023587 chr1:67695078 G>A
- Sequence
cacacataattttcaagccagagt[G/A]gtgtcacggcaagcatgggtatgc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ARI1B_HUMAN IKZF1_HUMAN MTG16_HUMAN RFX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ARI1B_HUMAN | n/a | 1.18 | 2.00 | n/a | n/a | |||
| IKZF1_HUMAN | -1.39 | 2.69 | 2.00 | n/a | No Hit | |||
| MTG16_HUMAN | n/a | 2.89 | 2.00 | n/a | n/a | |||
| RFX1_HUMAN | n/a | 2.53 | 2.00 | -1.88 | Weak Discordant | |||
| REQU_HUMAN | -3.23 | 2.61 | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GRASP 2 hour glucose, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd