rs12033568 chr1:205121977 G>C
- Sequence
gtggtggacgccgcgaagagactg[G/C]cgcaagctccgaagactttcggcc
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells) monocyte-derived dendritic cells
- ASB for transcription factors
- FOXK2_HUMAN MEIS2_HUMAN ATF4_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.81 | 0.33 | 1.92 | n/a | n/a | |||
| MEIS2_HUMAN | 2.34 | n/a | 2.50 | n/a | No Hit | |||
| ATF4_HUMAN | 1.67 | n/a | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Coronary, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Ovary, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Thyroid, Vagina, Whole_Blood