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rs12035664 chr1:156678139 G>A

Sequence
tataactgcgaggttcaaacatcc[G/A]ctttaggaagttctgttcttgggg
ASB in cell types
HEK293 (embryonic kidney) HeLa S3 (cervical adenocarcinoma)
ASB for transcription factors
ZSCA4_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZSCA4_HUMAN 2.27 n/a 0.021.00 2.00 n/a n/a
CTCF_HUMAN 0.57 0.45 0.031.00 1.37 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP triglycerides
GTEx eQTL Cells_Cultured_fibroblasts Esophagus_Mucosa Ovary

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