ADASTRA v1.6.10
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rs12038338
chr1:40862833
G
>
T
Sequence
acagggcgcatgcaccttagcggt[G/T]cagggtccccgcaggaggtcagct
ASB in cell types
HEK293T (embryonic kidney)
CD8+ T-cells
ASB for transcription factors
SCRT2_HUMAN
STA5B_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SCRT2_HUMAN
n/a
2.40
1.00
4.0·10
-3
2.00
n/a
n/a
STA5B_HUMAN
1.67
n/a
0.04
1.00
2.00
n/a
No Hit
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5
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Cells_Cultured_fibroblasts
,
Pancreas
,
Skin_Sun_Exposed_Lower_leg
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)