rs12045544 chr1:43959042 C>T
- Sequence
gtgatatatttggtcctctgactc[C/T]atgaatgacctataattgcctcac
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- GLIS1_HUMAN ZN629_HUMAN ZN639_HUMAN INSM2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GLIS1_HUMAN | n/a | 0.98 | 2.00 | n/a | n/a | |||
| ZN629_HUMAN | n/a | 0.89 | 2.00 | n/a | n/a | |||
| ZN639_HUMAN | -2.04 | 2.25 | 2.00 | n/a | n/a | |||
| INSM2_HUMAN | -1.97 | 2.32 | 2.00 | n/a | n/a | |||
| ATF2_HUMAN | n/a | 2.23 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Thyroid, Whole_Blood